CANCER: Abnormalities

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Wednesday, June 19, 2013

A Wide Variety Of Advanced Cancers Harbor Abnormalities In HER2 Gene

Main Category: Cancer / Oncology
Also Included In: Genetics
Article Date: 04 Jun 2013 - 1:00 PDT Current ratings for:
A Wide Variety Of Advanced Cancers Harbor Abnormalities In HER2 Gene
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The HER2 growth-factor gene is known to be over-active in breast and gastro-esophageal cancers. But now, irregularities in the genes 's expression - among them mutations, amplifications, substitutions, and translocations - have been found in 14 different advanced solid tumors.

The results of the study of more than 2,000 tumors, presented at the annual meeting of the American Society of Clinical Oncology (ASCO), both surprised researchers and provided hope that some of these tumors might benefit from the three anti-HER2 therapies now in clinical use.

"No one ever thought that there would be such a variety of genomic alterations in HER2 in this many solid tumors," says Massimo Cristofanilli, MD, FACP, Professor of Medical Oncology and Director of the Jefferson Breast Center at the Kimmel Cancer Center and Thomas Jefferson University Hospital.

"But this may be good news, both clinically and scientifically," he says. "It tells us that these tumors might benefit from treatment that we already have on hand, and, from a research perspective, it builds on the idea that it is the genomic profile of a tumor that is relevant in providing biological information for planning of personalized treatments - not where the cancer is located or where it develops.'

Dr. Cristofanilli presented the results of the study in an oral presentation at the ASCO meeting. He is one of a group of co-authors from many institutions who donated tumor samples to Foundation Medicine, a cancer diagnostics company in Cambridge, Massachusetts. Foundation Medicine led and paid for the study.

Dr. Cristofanilli contributed about 50 metastatic breast tumor samples for the analysis, and found out that one of his patients with advanced triple negative breast cancer had a HER2 mutation. "My patient was treated with Herceptin as well as chemotherapy, and derived clinical benefit," he says. "No one looks for HER2 mutations in this form of breast cancer. To me, this makes the case for the value of genome-driven therapy."

In the study, Foundation Medicine conducted a genetic screen of more than 182 genes and 14 genetic rearrangements known to be linked to cancer in 2,223 tumor specimens. Twenty different advanced solid cancers were represented.

Researchers found HER2 alterations in 14 types of solid tumors, including 29 percent of esophageal, 20 percent of uterine, 14 percent of breast, 12 percent of stomach carcinomas, and 6 percent of all lung cancer samples.

They also found HER2 irregularities varied widely - 4.9 percent of specimens had 116 different HER2 alterations. That included 58 percent with amplifications, 25 percent with substitutions, 14 percent with indels (insertions/deletions of DNA), 2 percent with splice site variants, 2 percent with translocations, 5 percent with multiple alterations, and 2 tumors had both HER2 substitution and amplification.

Anti-HER2 therapies such as Herceptin can also treat HER2 mutations, and may also help block HER2 that is altered in the ways seen in the study, Dr. Cristofanilli says.

"This study highlights the need to study a broad range of genes at a high level of sensitivity and specificity when searching for novel targets of therapy," he says. "Widespread use of this approach could provide more treatment options and enable more rapid accrual to ongoing and planned trials of agents targeting pathways under study."

Article adapted by Medical News Today from original press release. Click 'references' tab above for source.
Visit our cancer / oncology section for the latest news on this subject. Dr. Cristofanilli declares no conflicts of interest related to this study.
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posted by John M. on 4 Jun 2013 at 11:37 am

I often think of cancer as a disease where the body doesn't attack its own tissue and autoimmune diseases as a disease where it attacks it too much. So it occurs to me that like cancer maybe some autoimmune diseases of different organs may be caused by the same underlying genetic mutation and therefore you could determine if drugs that treat one type of autoimmune disease might treat others . . .

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Friday, June 14, 2013

HER2 Abnormalities Found In Many Advanced Cancers

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Main Category: Cancer / Oncology
Also Included In: Genetics
Article Date: 03 Jun 2013 - 3:00 PDT Current ratings for:
HER2 Abnormalities Found In Many Advanced Cancers
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We already know that an over-active HER2 growth factor gene features in breast and gastric cancers. Now a new study reports finding mutations and other abnormalities of the gene in 14 different advanced cancers.

Massimo Cristofanilli, Director of the Jefferson Breast Center at the Kimmel Cancer Center and Thomas Jefferson University Hospital, announced the study results at an oral presentation during the annual meeting of the American Society of Clinical Oncology (ASCO), which is taking place in Chicago until Tuesday.

The gene for human epidermal growth factor receptor 2 (HER2) codes for a protein that promotes the growth of cancer cells. In around 1 in 5 breast cancers, a mutation in the gene causes cancer cells to make too much HER2 protein. The same mutation and the higher protein levels that result, occur in many types of cancer.

But Cristofanilli's results suggest there may be several kinds of gene alteration that can have this effect: not just known mutations but also other irregularities such as amplifications, substitutions, and translocations.

Cancer is essentially a disease of failure to regulate tissue growth. It is when the genes that regulate normal cell growth become altered in some way that the cell becomes cancerous.

Every time a cell divides, the enormous amount of data contained in its genetic material is replicated. When this happens, the chances are that some errors (mutations) will occur. Cells have complex mechanisms to prevent and correct such errors. And even if the faulty cell survives, there is another process, cell suicide or apoptosis, that the body uses to deal with rogue cells.

But if all these error controls fail, then the mutations and alterations survive and are passed on to daughter cells, to sow the seeds of a tumor.

Large-scale mutations occur when a large portion of genetic material is deleted or an extra portion is added. Amplification is when a cell gains many copies of genetic material, usually containing genes known to be cancer-causing. Translocation is when two separate regions become fused.

Small-scale mutations such as point substitutions, deletions and insertions are alterations to the building block units of DNA. For instance, a substitution is a mutation that exchanges two letters of the DNA code, like changing the spelling of a word by swapping around two of its letters.

Small-scale mutations usually affect the expression of a gene and alter the function or stability of the protein it codes for.

There are also other ways genes can change to make cells cancerous, such as when viruses insert bits of their DNA into the genetic material of the host cell, causing, for example, switched off cancer genes to switch on.

In this new study, which examined more than 2,000 tumors, Cristofanilli, a professor of Medical Oncology, and colleagues, found HER2 gene irregularities in 14 different advanced solid tumors.

"No one ever thought that there would be such a variety of genomic alterations in HER2 in this many solid tumors," Cristofanilli says in a statement.

But he says the findings could be good news, "both clinically and scientifically".

It could mean Herceptin and other anti-HER2 cancer therapies that are already in clinical use might help patients with some of these tumors.

From a research point of view, the results add weight to the growing idea of "genome-driven therapy", where the genome profile of the tumor, rather than where it develops, is more important when considering how best to treat the individual patient's cancer.

A number of institutions donated tumor samples for analysis, and their researchers are co-authors of the study. Cristofanilli contributed about 50 breast cancer samples. He discovered that one sample showed one of his patients, who had been diagnosed with triple negative breast cancer, had an HER2 mutation.

"My patient was treated with Herceptin as well as chemotherapy, and derived clinical benefit," says Cristofanilli.

"No one looks for HER2 mutations in this form of breast cancer. To me, this makes the case for the value of genome-driven therapy," he explains.

Foundation Medicine, a cancer diagnostics company in Cambridge, Massachusetts led and paid for the study. They screened 2,223 solid tumor specimens from 20 different advanced cancers, for more than 182 genes alterations known to be linked to cancer.

The results showed HER2 alterations in 14 types of solid tumor. Of these, 29% were esophageal cancer samples, 20% were uterine, 14% were breast, 12% were stomach, and 6% were lung.

They also found large variations in HER2 abnormalities. They found nearly 5% of samples had 116 different abnormalities, including 58% with amplifications, 25% with substitutions, 14% with insertions or deletions, 2% with splice site variants, 2% with translocations, and 5% with more than one alteration. Plus, two of the tumors had both HER2 substitution and amplification.

Cristofanilli says the study "highlights the need to study a broad range of genes at a high level of sensitivity and specificity when searching for novel targets of therapy".

"Widespread use of this approach could provide more treatment options and enable more rapid accrual to ongoing and planned trials of agents targeting pathways under study," he adds.

Another study reported earlier this year found that while some gene alterations may actively drive tumor growth, there may also be some "passenger" alterations that do the opposite and slow cancer down, suggesting cancer may not be a sequence of inevitable accumulation of driver events, but a delicate balance between drivers and passengers.

Written by Catharine Paddock PhD

Copyright: Medical News Today
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